Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_5916914_5918778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5916914 - 5918778

Intron Length:

1865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAGTG

5'SS Class:

major

3'SS Sequence:

TACCTCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

AGTATTTTCACA

Flanking Amino Acid:

TPDLFQKGCQVYLGNHYFQN

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

63.4

41.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

74.3

0.55

0.8

66.2

35.5

Minor 5ss

32.3

-2

3.7

46.7

48.6

Minor BPS

49.9

-0

1.7

62.55

37.7

Associated Gene:

Gene:

ENPEP

Ensembl Gene ID:

ENSAPLG00000012392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012977

5896279 - 5929112

32834

ENSAPLT00000045830

5895021 - 5929112

34092