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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5925814_5925920_F


Intron Information:

Intron Rank:
15

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
5925814 - 5925920

Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTGAACAG

5'SS Class:
weak_major

3'SS Sequence:
CTTTCTTTTAAAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAGGAAT

U12 Branch Point Sequence:
TTTCTTTTAAAG

Flanking Amino Acid:
GWNDSGDHLERLLRASVLDF

Intron Amino Acid Position:
744

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
57
0.17
1.2
47.9
42.4

Major BPS
47.2
-0.1
1.4
53.4
40.4

Major PPT
80.4
0.68
1
81.8
27.5

Minor 5ss
25.6
-2.8
3.1
30
43

Minor BPS
65.1
0.33
1.4
69.62
37.6

Associated Gene:

Gene:
ENPEP

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5895021 - 5929112
34092

5896279 - 5929112
32834