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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59351334_59353896_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59351334 - 59353896

Intron Length:
2563

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTGCTG

5'SS Class:
major

3'SS Sequence:
TTTTTGTTTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACTTCAT

U12 Branch Point Sequence:
TGTCTTTGAAAC

Flanking Amino Acid:
AKKKELQLQEADSQVEQNRK

Intron Amino Acid Position:
98

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.1
0.47
1.1
58.9
45.4

Major BPS
78.6
0.71
1
79.6
32.9

Major PPT
88.5
0.87
0.7
84.9
29.9

Minor 5ss
40.5
-1.1
3.3
55.9
48.3

Minor BPS
51.1
0.02
1.5
62.63
36

Associated Gene:

Gene:
ARHGAP10

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59294349 - 59436819
142471

59343713 - 59436819
93107