Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_59380359_59381668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59380359 - 59381668

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCCTC

5'SS Class:

major

3'SS Sequence:

CCTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATGGATAAACT

Flanking Amino Acid:

TITSAMKQYLRSLPEPLMTY

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

67.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

0.79

0.8

78.9

33.1

Minor 5ss

42.9

-0.8

3.1

60.8

43.7

Minor BPS

45.8

-0.2

2.3

70.02

46.5

Associated Gene:

Gene:

ARHGAP10

Ensembl Gene ID:

ENSAPLG00000014077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017628

59294349 - 59436819

142471

ENSAPLT00000014741

59343713 - 59436819

93107