Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_59384450_59385074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59384450 - 59385074

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCAAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCCTTCAATT

Flanking Amino Acid:

MLDILVKHLANVSKHAKRNL

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.9

0.52

0.9

70.7

33.9

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

69.6

0.69

1.5

85.73

34.4

Associated Gene:

Gene:

ARHGAP10

Ensembl Gene ID:

ENSAPLG00000014077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017628

59294349 - 59436819

142471

ENSAPLT00000014741

59343713 - 59436819

93107