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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59480661_59502186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59480661 - 59502186

Intron Length:

21526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TCTACGCTAACT

Flanking Amino Acid:

KCLQAGMNLGARKSKKLGKL

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

81.3

0.71

0.8

75.7

32.9

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

50.1

0.08

2.4

77.43

44.6

Associated Gene:

Gene:

NR3C2

Ensembl Gene ID:

ENSAPLG00000015146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020201

59449769 - 59643443

193675

ENSAPLT00000015830

59449288 - 59646206

196919