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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59502304_59537094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59502304 - 59537094

Intron Length:

34791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CATACTCTAATA

Flanking Amino Acid:

CKVFFKRAVEGQHNYLCAGR

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

76.5

0.6

74.3

40.5

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

51.6

0.05

1.7

61.79

38.6

Associated Gene:

Gene:

NR3C2

Ensembl Gene ID:

ENSAPLG00000015146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020201

59449769 - 59643443

193675

ENSAPLT00000015830

59449288 - 59646206

196919