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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59537235_59641668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59537235 - 59641668

Intron Length:

104434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

VLEYIPENVSSSSLRSVSTG

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

88.3

0.86

0.8

81.3

36.4

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

NR3C2

Ensembl Gene ID:

ENSAPLG00000015146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020201

59449769 - 59643443

193675

ENSAPLT00000015830

59449288 - 59646206

196919