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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59732878_59813970_F

Intron Information:

Intron Rank:

130927

Intron Class:

major

Intron Phase:

Intron Coordinates:

59732878 - 59813970

Intron Length:

81093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TACTCTTTCATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

80.1

0.68

0.9

76.9

42.1

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

58.9

0.27

1.7

67.71

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019716

59731086 - 59814164

83079