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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59897140_59902525_R

Intron Information:

Intron Rank:

133237

Intron Class:

major

Intron Phase:

Intron Coordinates:

59897140 - 59902525

Intron Length:

5386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CTCTCTTGCAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

75.5

0.63

1.1

34.4

Major PPT

63.7

0.31

1.1

65.6

33.8

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

45.4

-0.3

56.75

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020221

59896527 - 59903279

6753