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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60123991_60152037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60123991 - 60152037

Intron Length:

28047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATTTTACTT

Flanking Amino Acid:

KRLCTLDGKQVTCLQDFFGD

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

67.7

0.4

1.1

65.5

40.5

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

61.4

0.44

1.6

79.53

37.3

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048143

60111132 - 60195664

84533

ENSAPLT00000016399

60111132 - 60190281

79150