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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60158657_60169250_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60158657 - 60169250

Intron Length:

10594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAGAACCA

5'SS Class:

weak_major

3'SS Sequence:

TGCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TCTTCCTTCATT

Flanking Amino Acid:

PGSFRGLKVSSVNGNKCSVS

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.1

36.8

Major BPS

0.62

1.1

77.2

Major PPT

88.3

0.86

0.7

83.9

31.1

Minor 5ss

32.1

-2

3.4

40.8

40.6

Minor BPS

73.6

0.83

1.7

87.41

38.9

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048143

60111132 - 60195664

84533

ENSAPLT00000016399

60111132 - 60190281

79150