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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60173219_60176961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60173219 - 60176961

Intron Length:

3743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTAC

5'SS Class:

major

3'SS Sequence:

TTTTACTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TACTCTTTTACT

Flanking Amino Acid:

IIDKAKCCGKEHLIENEVSI

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

61.1

40.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.52

67.1

43.5

Minor 5ss

41.5

-0.9

3.4

58.4

46.5

Minor BPS

68.2

0.65

1.6

80.72

41.1

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048143

60111132 - 60195664

84533

ENSAPLT00000016399

60111132 - 60190281

79150