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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60183550_60184522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60183550 - 60184522

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGATA

5'SS Class:

major

3'SS Sequence:

CTTGTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCAACTGAGCA

Flanking Amino Acid:

YVAPEIIAETGYGLKVDIWA

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

74.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

82.2

0.73

0.8

80.6

31.4

Minor 5ss

-2.3

3.2

31.2

42.7

Minor BPS

47.5

-0.1

1.9

62.44

43.1

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048143

60111132 - 60195664

84533

ENSAPLT00000016399

60111132 - 60190281

79150