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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60189203_60190263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60189203 - 60190263

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATTTGACA

Flanking Amino Acid:

NTSAGVSVIMFDLTV*

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

79.3

0.66

37.6

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

65.4

0.48

1.5

77.03

33.1

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016399

60111132 - 60190281

79150