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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60189203_60194409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60189203 - 60194409

Intron Length:

5207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTATATTT

Flanking Amino Acid:

NTSAGVSVIMNTALDKESQI

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

49.9

0.07

1.8

72.8

38.7

Associated Gene:

Gene:

DCLK2

Ensembl Gene ID:

ENSAPLG00000015696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048143

60111132 - 60195664

84533