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Intron Name: Anas_platyrhynchos_platyrhynchos_4_6020064_6031462_F

Intron Information:

Intron Rank:

128561

Intron Class:

major

Intron Phase:

Intron Coordinates:

6020064 - 6031462

Intron Length:

11399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGACTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTGGTTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

71.9

0.49

67.1

43.8

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

61.1

0.43

1.9

82.48

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032763

5989058 - 6031759

42702