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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60207860_60214168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60207860 - 60214168

Intron Length:

6309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GATTTCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATATATTTACCA

Flanking Amino Acid:

ATMETDDKIKAIQLSRDGQY

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

70.1

0.45

0.8

67.2

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

55.1

0.16

1.8

67.54

38.7

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774