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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60214384_60215619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60214384 - 60215619

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GAGTTTTTATTC

Flanking Amino Acid:

ELGLVISGSKEGPCLIHSMN

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.1

0.61

0.8

72.4

32.5

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

49.8

-0

1.5

55.2

37.6

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774