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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60237771_60241099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60237771 - 60241099

Intron Length:

3329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGTCAC

5'SS Class:

major

3'SS Sequence:

TCTTTCTGTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

AATTTATTGATT

Flanking Amino Acid:

QLPVEIDPLIASNTGMHRRQ

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

41.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

85.2

0.79

0.8

84.4

30.5

Minor 5ss

-1.6

2.7

44.2

43.6

Minor BPS

59.2

0.37

1.6

74.8

35.6

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774