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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60302179_60313448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60302179 - 60313448

Intron Length:

11270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

CATTTATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTATA

Flanking Amino Acid:

NSQRDTSDIKELIPEFYYLP

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

100

1.24

0.5

100

Major PPT

0.58

69.8

39.5

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

64.8

0.46

1.9

80.63

34.6

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774