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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60333454_60335411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60333454 - 60335411

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAC

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTTTCCAATA

Flanking Amino Acid:

IGATFGLPQTRRISLASPRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

32.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

46.6

-0.3

2.5

61.2

43.7

Minor BPS

53.2

0.1

1.8

71.6

34.7

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774