Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_60335515_60337216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60335515 - 60337216

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTGA

5'SS Class:

major

3'SS Sequence:

CTTGTGTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTGTATTTCATT

Flanking Amino Acid:

TALEIFMANRVGVMFNFPDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

59.6

41.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.8

0.62

0.9

71.5

38.3

Minor 5ss

35.1

-1.7

3.4

47.8

47.7

Minor BPS

54.3

0.22

1.9

76.19

41.2

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953

ENSAPLT00000016867

60205380 - 60341153

135774