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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60553399_60555558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60553399 - 60555558

Intron Length:

2160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAAGAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTCATTTATTT

Flanking Amino Acid:

SKLQGEKGRWPPHAGKLLSV

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

64.6

35.4

Major BPS

0.75

78.6

Major PPT

86.1

0.81

0.9

87.9

29.5

Minor 5ss

28.7

-2.4

3.3

29.3

43.4

Minor BPS

56.8

0.29

1.7

78.23

38.3

Associated Gene:

Gene:

LRBA

Ensembl Gene ID:

ENSAPLG00000016386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017110

60205380 - 60590332

384953