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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60612221_60612551_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60612221 - 60612551

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGGGCG

5'SS Class:

major

3'SS Sequence:

TGTCCCAACGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGATATTGAATG

Flanking Amino Acid:

KGGKKGAKKKVVDPFSKKDW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

55.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.09

1.1

34.5

Minor 5ss

31.5

-2.1

3.6

39.7

45.8

Minor BPS

47.4

-0.3

1.6

49.57

37.9

Associated Gene:

Gene:

RPS3A

Ensembl Gene ID:

ENSAPLG00000003402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003471

60612159 - 60615713

3555