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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60621491_60622825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60621491 - 60622825

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTTAC

U12 Branch Point Sequence:

CTTCTCTTACAG

Flanking Amino Acid:

GENEDELSFKAGDIIAELES

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

50.1

1.2

43.1

39.2

Major PPT

85.5

0.8

0.7

79.5

26.2

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

49.4

-0.1

1.8

57.38

44.1

Associated Gene:

Gene:

SH3D19

Ensembl Gene ID:

ENSAPLG00000003562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033409

60621374 - 60651325

29952

ENSAPLT00000018556

60621374 - 60652888

31515

ENSAPLT00000003646

60621374 - 60651325

29952

ENSAPLT00000033857

60621374 - 60632841

11468