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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60625054_60628553_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60625054 - 60628553

Intron Length:

3500

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCTTTGTAT

5'SS Class:

weak_major

3'SS Sequence:

GAAATATACAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TGGCCACTAATA

Flanking Amino Acid:

PASFVKVVVCSKFLSCLCRG

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.4

53.2

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

47.6

-0.1

1.1

41.9

41.1

Minor 5ss

30.6

-2.2

4.1

47.2

48.3

Minor BPS

47.6

-0.1

1.9

59.97

39.5

Associated Gene:

Gene:

SH3D19

Ensembl Gene ID:

ENSAPLG00000003562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033409

60621374 - 60651325

29952