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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60634258_60636554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60634258 - 60636554

Intron Length:

2297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATC

Flanking Amino Acid:

PNSGDLVKKLDLDHSEQAGA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.3

0.55

0.9

69.9

36.1

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

74.9

0.76

1.1

33.7

Associated Gene:

Gene:

SH3D19

Ensembl Gene ID:

ENSAPLG00000003562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003646

60621374 - 60651325

29952