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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60796626_60800421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60796626 - 60800421

Intron Length:

3796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

TATCATTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

ATTTCCAGATCA

Flanking Amino Acid:

LTSRINTPFRLCVVSLALFR

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

82.1

0.72

0.9

73.3

41.3

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

51.9

0.06

72.21

39.2

Associated Gene:

Gene:

FAM160A1

Ensembl Gene ID:

ENSAPLG00000003814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003904

60775872 - 60803703

27832