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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60802165_60802594_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60802165 - 60802594

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGCTAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTGAC

U12 Branch Point Sequence:

GTCTTAGTGACT

Flanking Amino Acid:

ILWTKAAQTEELLCCFLIAC

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

63.6

0.34

1.2

55.1

42.1

Major PPT

56.7

0.15

1.7

64.8

41.4

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

46.3

-0.2

2.2

68.3

42.7

Associated Gene:

Gene:

FAM160A1

Ensembl Gene ID:

ENSAPLG00000003814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003904

60775872 - 60803703

27832