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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60820874_60824668_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

60820874 - 60824668

Intron Length:

3795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTTAGCACT

5'SS Class:

major

3'SS Sequence:

ACGATTTCAAGAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TTTTCTTTAACG

Flanking Amino Acid:

NLYRNLLETNASFLLPSTIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.5

67.4

43.6

Major BPS

74.7

0.61

65.9

40.9

Major PPT

-0.1

1.7

50.9

42.2

Minor 5ss

39.8

-1.1

2.8

51.5

37.9

Minor BPS

87.8

1.05

87.23

30.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036376

60820784 - 60825457

4674