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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60840349_60841301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60840349 - 60841301

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

GCAAGCTTATTT

Flanking Amino Acid:

NSIRFLAKAIDYEIQRQIEE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

80.5

0.69

81.2

36.5

Minor 5ss

33.8

-1.8

3.4

49.7

46.6

Minor BPS

45.4

-0.2

58.04

44.9

Associated Gene:

Gene:

GATB

Ensembl Gene ID:

ENSAPLG00000003933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004045

60821870 - 60864528

42659