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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60896215_60897417_R

Intron Information:

Intron Rank:

152294

Intron Class:

major

Intron Phase:

Intron Coordinates:

60896215 - 60897417

Intron Length:

1203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGCATT

5'SS Class:

major

3'SS Sequence:

ATTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.3

72.7

44.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.3

0.73

0.8

75.2

Minor 5ss

40.3

-1.1

50.4

45.6

Minor BPS

68.7

0.66

1.5

85.14

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017465

60896135 - 60897518

1384