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Intron Name: Anas_platyrhynchos_platyrhynchos_4_60897545_60903378_R

Intron Information:

Intron Rank:

152295

Intron Class:

major

Intron Phase:

Intron Coordinates:

60897545 - 60903378

Intron Length:

5834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCAAA

U12 Branch Point Sequence:

TCCTGCCAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

30.2

Major BPS

-0

1.3

56.7

38.7

Major PPT

84.1

0.77

0.8

77.2

37.1

Minor 5ss

41.4

-1

2.9

49.9

46.4

Minor BPS

40.9

-0.6

2.3

52.61

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030220

60897180 - 60904187

7008