Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_6096434_6103768_F

Intron Information:

Intron Rank:

145720

Intron Class:

major

Intron Phase:

Intron Coordinates:

6096434 - 6103768

Intron Length:

7335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

TCTTATGATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TATCTCTTATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

40.1

Major BPS

84.6

0.86

41.2

Major PPT

0.56

69.6

40.4

Minor 5ss

38.9

-1.3

2.9

44.1

43.5

Minor BPS

51.3

0.04

1.9

65.54

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031491

6076864 - 6104135

27272