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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61082025_61083099_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
61082025 - 61083099

Intron Length:
1075

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTCTT

5'SS Class:
strong_major

3'SS Sequence:
CTTGTTCCTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCCAAT

U12 Branch Point Sequence:
CCAATACTAAGT

Flanking Amino Acid:
TVRCMHLHEKRVVSGSRDAT

Intron Amino Acid Position:
469

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.2
1.11
0.7
90.9
28.7

Major BPS
71.8
0.54
1.2
79
32.5

Major PPT
83.1
0.74
0.8
77.4
31.4

Minor 5ss
40.2
-1.1
3.1
58.6
45.9

Minor BPS
39.3
-0.7
2
50.74
43

Associated Gene:

Gene:
FBXW7

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61076312 - 61107596
31285

61075566 - 61242889
167324

61076312 - 61235865
159554