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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61090258_61094697_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
61090258 - 61094697

Intron Length:
4440

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGAAAC

5'SS Class:
strong_major

3'SS Sequence:
CTTTTTTTCACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTCAA

U12 Branch Point Sequence:
CTTTTTTTCACA

Flanking Amino Acid:
RDFISLLPKELALYVLSFLE

Intron Amino Acid Position:
284

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.1
0.9
0.8
80.3
26.9

Major BPS
78.4
0.71
0.9
81.3
29.8

Major PPT
90.7
0.91
0.6
86.9
23.9

Minor 5ss
28.3
-2.5
2.8
33.7
41.9

Minor BPS
62.6
0.39
1.7
73.92
38.7

Associated Gene:

Gene:
FBXW7

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61075566 - 61242889
167324

61076312 - 61235865
159554

61076312 - 61107596
31285