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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61094835_61097016_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61094835 - 61097016

Intron Length:

2182

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCAAGAAAA

5'SS Class:

major

3'SS Sequence:

ACATTGGTGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAACAT

U12 Branch Point Sequence:

CTGTGGCAAACA

Flanking Amino Acid:

ASNFSGPLQLFVNALLINNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.5

61.2

39.2

Major BPS

50.9

0.02

1.1

36.1

Major PPT

59.3

0.21

1.2

53.9

45.1

Minor 5ss

25.4

-2.8

3.9

41.3

44.8

Minor BPS

36.6

-1

2.6

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033301

61094756 - 61097264

2509