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Intron Name: Anas_platyrhynchos_platyrhynchos_4_6118290_6158412_F

Intron Information:

Intron Rank:

135239

Intron Class:

major

Intron Phase:

Intron Coordinates:

6118290 - 6158412

Intron Length:

40123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CTGAGCTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

71.1

0.47

0.8

64.1

31.2

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

48.6

-0.1

59.79

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046997

6118042 - 6159028

40987