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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61307301_61313306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61307301 - 61313306

Intron Length:

6006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCAGT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCTTTATAATT

Flanking Amino Acid:

VRKWSLNTYKCTRQIISEKL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

44.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

85.8

0.8

77.7

40.7

Minor 5ss

-1.1

3.2

46.3

Minor BPS

63.2

0.49

1.6

79.74

Associated Gene:

Gene:

ARFIP1

Ensembl Gene ID:

ENSAPLG00000000892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032899

61288557 - 61325204

36648

ENSAPLT00000000913

61288557 - 61325204

36648