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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61313529_61316940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61313529 - 61316940

Intron Length:

3412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAGAT

U12 Branch Point Sequence:

TGATCTACAGTT

Flanking Amino Acid:

DLSLKSLELHEEFGYNADTQ

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.5

37.2

Major BPS

0.35

1.3

60.7

45.9

Major PPT

78.6

0.64

0.9

71.5

38.4

Minor 5ss

40.3

-1.1

3.4

62.1

42.3

Minor BPS

44.5

-0.3

1.9

63.08

41.1

Associated Gene:

Gene:

ARFIP1

Ensembl Gene ID:

ENSAPLG00000000892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032899

61288557 - 61325204

36648

ENSAPLT00000000913

61288557 - 61325204

36648