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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61317099_61320029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61317099 - 61320029

Intron Length:

2931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTTA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAC

U12 Branch Point Sequence:

TTGCCTTTACGT

Flanking Amino Acid:

LLTVKQYESARIEYDAYRTD

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

70.8

35.5

Major BPS

57.5

0.19

1.1

55.1

40.5

Major PPT

91.7

0.94

0.6

91.6

19.7

Minor 5ss

45.8

-0.4

3.2

63.9

47.7

Minor BPS

52.3

0.15

1.9

72.68

44.6

Associated Gene:

Gene:

ARFIP1

Ensembl Gene ID:

ENSAPLG00000000892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032899

61288557 - 61325204

36648

ENSAPLT00000000913

61288557 - 61325204

36648