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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61340979_61341555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61340979 - 61341555

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

GTATGCTCAATT

Flanking Amino Acid:

NIGIFLKQFKKSAESIIEDI

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.4

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

79.6

0.67

79.2

38.4

Minor 5ss

-1.2

3.1

47.7

42.3

Minor BPS

0.23

74.07

42.7

Associated Gene:

Gene:

FHDC1

Ensembl Gene ID:

ENSAPLG00000001912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001919

61333646 - 61364093

30448