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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61350615_61353212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61350615 - 61353212

Intron Length:

2598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGCTCCTTACAG

Flanking Amino Acid:

DMKIIRRATKELMTCEELHS

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

79.1

0.66

0.8

72.3

32.5

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

56.2

0.06

1.9

61.3

46.1

Associated Gene:

Gene:

FHDC1

Ensembl Gene ID:

ENSAPLG00000001912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001919

61333646 - 61364093

30448