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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61353284_61353383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61353284 - 61353383

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CGCACCTCAGCT

Flanking Amino Acid:

VLQAGNIMNAGGYAGNAVGF

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

33.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

85.1

0.79

0.6

84.3

23.6

Minor 5ss

33.5

-1.9

3.2

44.3

43.6

Minor BPS

47.5

-0.1

1.9

61.88

47.4

Associated Gene:

Gene:

FHDC1

Ensembl Gene ID:

ENSAPLG00000001912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001919

61333646 - 61364093

30448