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Intron Name: Anas_platyrhynchos_platyrhynchos_4_6135797_6139994_R

Intron Information:

Intron Rank:

134985

Intron Class:

major

Intron Phase:

Intron Coordinates:

6135797 - 6139994

Intron Length:

4198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TGAATTTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

72.6

0.51

0.9

69.8

41.2

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

57.9

0.33

1.7

75.7

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034276

6131664 - 6140151

8488