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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61382107_61382506_F

Intron Information:

Intron Rank:

147140

Intron Class:

major

Intron Phase:

Intron Coordinates:

61382107 - 61382506

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCTG

5'SS Class:

major

3'SS Sequence:

TTGTTTTACTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

ATTGTTTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

60.4

45.8

Major BPS

68.8

0.47

1.2

63.4

Major PPT

81.3

0.7

0.9

81.3

35.4

Minor 5ss

27.5

-2.6

3.5

37.1

47.5

Minor BPS

51.9

0.04

1.6

63.17

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038478

61381898 - 61382977

1080