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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61471077_61478000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61471077 - 61478000

Intron Length:

6924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CAACCAACTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCCCTCTCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

60.2

0.23

48.5

38.9

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

56.9

0.2

1.6

63.43

42.2

Associated Gene:

Gene:

TRIM2

Ensembl Gene ID:

ENSAPLG00000001980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002018

61470894 - 61513966

43073