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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61480507_61486827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61480507 - 61486827

Intron Length:

6321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCACTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

TGTGTCTGAATC

Flanking Amino Acid:

PLSCPNHDGNVMEFYCQSCE

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.4

36.1

Major BPS

0.3

1.4

71.9

Major PPT

79.6

0.67

0.9

76.5

37.4

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

58.8

0.25

1.5

67.42

38.4

Associated Gene:

Gene:

TRIM2

Ensembl Gene ID:

ENSAPLG00000001980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032556

61451614 - 61514889

63276

ENSAPLT00000028302

61407489 - 61513966

106478

ENSAPLT00000002018

61470894 - 61513966

43073