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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61487847_61490478_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61487847 - 61490478

Intron Length:

2632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATGC

5'SS Class:

major

3'SS Sequence:

GCAATGCACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGATGCTAATCT

Flanking Amino Acid:

LEVNYGLKHKVLQTQLDTLL

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

69.7

36.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

54.6

0.1

46.1

40.4

Minor 5ss

-1.1

3.1

51.1

39.8

Minor BPS

-0.1

2.3

69.4

Associated Gene:

Gene:

TRIM2

Ensembl Gene ID:

ENSAPLG00000001980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028302

61407489 - 61513966

106478

ENSAPLT00000002018

61470894 - 61513966

43073

ENSAPLT00000032556

61451614 - 61514889

63276